BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A03LP1|AL426932
(756 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1460 0.0
>3x_Contig1461
Length = 5478
Score = 1460 bits (734), Expect = 0.0
Identities = 752/758 (99%), Gaps = 2/758 (0%)
Strand = Plus / Minus
Query: 1 gaaggatgaatcctcaaatacatccatttagtggttgggataaaaaacaattacaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3356 gaaggatgaatcctcaaatacatccatttagtggttgggataaaaaacaattacaaatga 3297
Query: 61 agagaatttagggttaagtacatgaaatataagtcaaacagtgtagaaagatgcatgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3296 agagaatttagggttaagtacatgaaatataagtcaaacagtgtagaaagatgcatgata 3237
Query: 121 tggaaacaagatacaaaaaacgaacagggagcaatgcaattctagagactacttcgattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3236 tggaaacaagatacaaaaaacgaacagggagcaatgcaattctagagactacttcgattg 3177
Query: 181 aagaactatctctgggatctaaaacaattattattatgtcaaaacgaagaagaataatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3176 aagaactatctctgggatctaaaacaattattattatgtcaaaacgaagaagaataatac 3117
Query: 241 tgctcgtgtagatgtacagtagctcatgttgtaatgctgctgctcttatttcatgcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3116 tgctcgtgtagatgtacagtagctcatgttgtaatgctgctgctcttatttcatgcaagg 3057
Query: 301 aataatgtggcagaacagtgttgaattttaggtctgaaaggagagagtgccagatgaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 aataatgtggcagaacagtgttgaattttaggtctgaaaggagagagtgccagatgaatc 2997
Query: 361 accatctgtattttttttatttgttttttttattttcttctcaaccagtgggattatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2996 accatctgtattttttttatttgttttttttattttcttctcaaccagtgggattatcct 2937
Query: 421 ccttaacaggagtgaaaaaataaaaagggaaacacaaaaacgaaaatcgagatttgtata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2936 ccttaacaggagtgaaaaaataaaaagggaaacacaaaaacgaaaatcgagatttgtata 2877
Query: 481 taaaggggagaatcgttgatgaaaaagaaggggaagaaaaaaagctaaaagtgcgaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2876 taaaggggagaatcgttgatgaaaaagaaggggaagaaaaaaagctaaaagtgcgaattt 2817
Query: 541 taccatttgaaaaaatactgaaaaahataacagagggtattgagaagatgaaaaahatga 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 2816 taccatttgaaaaaatactgaaaaaaataacagagggtattgagaagatgaaaaaaatga 2757
Query: 601 atgcatttttgamatatag-aacgtgagggctaatagaaagaagaccacgggtgagaaaa 659
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2756 atgcatttttgaaatatagaaacgtgagggctaatagaaagaagaccacgggtgagaaaa 2697
Query: 660 ataggccgggaggtacttcatgcgaaa-cagttgaagacgaatcggaaagagtttggaaa 718
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2696 ataggccgggaggtacttcatgcgaaagcagttgaagacgaatcggaaagagtttggaaa 2637
Query: 719 caaamttgagtaagatttggatgtagtcgttcgtcgaa 756
|||| |||||||||||||||||||||||||||||||||
Sbjct: 2636 caaacttgagtaagatttggatgtagtcgttcgtcgaa 2599
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8915
Number of Sequences: 1807
Number of extensions: 8915
Number of successful extensions: 150
Number of sequences better than 1.0e-20: 1
length of query: 756
length of database: 10,358,551
effective HSP length: 16
effective length of query: 740
effective length of database: 10,329,639
effective search space: 7643932860
effective search space used: 7643932860
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)